Miyakogusa Predicted Gene
- Lj2g3v1779800.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S9Z7_LOTJA |
404 |
93.3 |
93.3 |
(tr|I3S9Z7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G36720.1 |
242 |
70.1 |
82.8 |
| Symbols: HVA22K | HVA22-like protein K | chr4:17307769-17309668 FORWARD LENGTH=200 |
| Medicago |
Medtr5g019720.1 |
281 |
70.1 |
78.4 |
| TB2/DP1, HVA22 family protein | HC | chr5:7478465-7474504 | 20130731 |
| Soybean |
Glyma01g38370.1 |
294 |
72.4 |
82.7 |
|
| LJGI |
gnl|LJGI|TC59337 |
1255 |
100.0 |
100.0 |
similar to UniRef100_A7P945 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1779800.1 |
length: 209 aa. |
| IPR004345 |
TB2/DP1/HVA22-related protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12300 |
HVA22-LIKE |
6.5e-73 |
1-156 |
| HMMPfam |
PF03134 |
TB2_DP1_HVA22 |
6.9e-26 |
27-117 |
| no_ID |
|
| HMMPanther |
PTHR12300:SF12 |
HVA22-LIKE |
6.5e-73 |
1-156 |
| Seg |
seg |
seg |
NA |
166-177 |
- Wolf-PSORT
Lj2g3v1779800.1 nucl 4, chlo 3, cyto 3, mito 2, vacu 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1779800.1 |
|