Miyakogusa Predicted Gene

Lj2g3v1778710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S7X9_LOTJA 764 100.0 100.0 (tr|I3S7X9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G38150.2 292 52.6 62.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:17901211-17902119 REVERSE LENGTH=302
Medicago Medtr8g098445.1 440 58.1 66.6 | PPR containing plant-like protein | HC | chr8:41071236-41073243 | 20130731
Soybean Glyma11g07010.1 525 71.2 79.9  
LJGI gnl|LJGI|TC82344 2196 99.9 99.9 similar to UniRef100_A7P8U5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1778710.1 length: 369 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 8.6e-07 203-228
HMMPfam PF13041 PPR_2 8.1e-15 231-280
HMMTigr TIGR00756 PPR: 4.4e-07 203-231
234-268
269-302
ProfileScan PS51375 PPR 7.114 197-231
232-266
267-301
302-336
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-40 181-338
HMMPanther PTHR24015:SF0 SUBFAMILY 1.3e-40 181-338
Wolf-PSORT
Lj2g3v1778710.1	chlo_mito 5, chlo 4.5, mito 4.5, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1778710.1 Not targeted -36.787 -0.305 -3.874 45.85% -32.609