Miyakogusa Predicted Gene

Lj2g3v1757130.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KDL7_MEDTR 319 58.8 68.3 (tr|G7KDL7) DNA-3-methyladenine glycosylase OS=Medicago truncatula GN=MTR_5g020300 PE=4 SV=1
TAIR_pep AT1G75230.1 241 56.7 74.4 | Symbols: | DNA glycosylase superfamily protein | chr1:28234444-28236452 FORWARD LENGTH=391
Medicago Medtr5g020300.1 319 58.8 68.3 | HhH-GPD base excision DNA repair family protein | HC | chr5:7762506-7763905 | 20130731
Soybean Glyma04g03390.1 245 57.4 73.5  
LJGI gnl|LJGI|TC58653 1451 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1757130.2 length: 286 aa.
IPR003265 HhH-GPD domain
method AccNumber shortName E-value location
Biological Process GO:0006284 base-excision repair    
HMMPfam PF00730 HhH-GPD 6.4e-19 107-249
HMMSmart SM00478 endonuclease 1.5e-06 109-264
IPR011257 DNA glycosylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0006281 DNA repair    
Gene3D G3DSA:1.10.340.30 no description 9.4e-23 100-211
superfamily SSF48150 DNA-glycosylase 3.4e-32 87-260
IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal
Gene3D G3DSA:1.10.1670.10 no description 5.1e-11 212-262
no_ID  
HMMPanther PTHR31628 FAMILY 1.7e-68 42-267
Seg seg seg NA 40-61
133-146
Wolf-PSORT
Lj2g3v1757130.2	chlo 7.5, chlo_mito 5.33333, nucl 3, mito 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1757130.2