Miyakogusa Predicted Gene

Lj2g3v1734790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SB19_LOTJA 817 94.7 94.9 (tr|I3SB19) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G48330.2 475 58.9 70.5 | Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr5:19585989-19587729 FORWARD LENGTH=454
Medicago Medtr5g020630.1 624 71.8 79.9 | chromosome condensation regulator RCC1 repeat protein | HC | chr5:7906586-7903920 | 20130731
Soybean Glyma01g37910.1 584 73.2 81.6  
LJGI gnl|LJGI|TC71625 1181 100.0 100.0 similar to UniRef100_A7Q2U9 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1734790.1 length: 433 aa.
IPR000408 Regulator of chromosome condensation, RCC1
method AccNumber shortName E-value location
FPrintScan PR00633 RCCNDNSATION 4.1e-19 26-42
64-77
83-99
136-152
175-191
191-205
377-398
HMMPfam PF00415 RCC1 1e-06 135-184
188-271
381-430
ProfileScan PS50012 RCC1_3 14.001 25-80
81-143
136-188
189-274
275-322
332-381
382-433
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Gene3D G3DSA:2.130.10.30 no description 1.9e-82 26-431
superfamily SSF50985 RCC1/BLIP-II 1.5e-74 25-433
no_ID  
HMMPanther PTHR22870 REGULATOR 1.2e-179 26-432
HMMPanther PTHR22870:SF59 PREDICTED 1.2e-179 26-432
HMMPfam PF13540 RCC1_2 8.7e-08 64-91
Seg seg seg NA 119-138
Wolf-PSORT
Lj2g3v1734790.1	mito 8, chlo 4, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1734790.1