Miyakogusa Predicted Gene

Lj2g3v1730230.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7KF01_MEDTR 538 64.6 73.0 (tr|G7KF01) Uncharacterized protein OS=Medicago truncatula GN=MTR_5g020870 PE=2 SV=1

TAIR_pep AT3G50910.1 252 39.0 53.4 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr3:18920189-18921999 FORWARD LENGTH=447

Medicago Medtr5g020870.1 538 64.6 73.0 | plant/F18B3-190 protein, putative | HC | chr5:7998293-8003187 | 20130731

Soybean Glyma01g37730.1 517 64.5 73.6

LJGI gnl|LJGI|BW623153 918 99.6 99.6 similar to UniRef100_A7PUR9 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1730230.1 length: 426 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 248-269
328-349
356-377

Seg seg seg NA 15-28
238-251
371-382

Wolf-PSORT

Lj2g3v1730230.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1730230.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7KF01_MEDTR	538	64.6	73.0	(tr\|G7KF01) Uncharacterized protein OS=Medicago truncatula GN=MTR_5g020870 PE=2 SV=1
TAIR_pep	AT3G50910.1	252	39.0	53.4	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits to 75 proteins in 28 species: Archae - 0; Bacteria - 10; Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). \| chr3:18920189-18921999 FORWARD LENGTH=447
Medicago	Medtr5g020870.1	538	64.6	73.0	\| plant/F18B3-190 protein, putative \| HC \| chr5:7998293-8003187 \| 20130731
Soybean	Glyma01g37730.1	517	64.5	73.6
LJGI	gnl\|LJGI\|BW623153	918	99.6	99.6	similar to UniRef100_A7PUR9 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)

no_ID
Lj2g3v1730230.1				length: 426 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	248-269 328-349 356-377
Seg	seg	seg	NA	15-28 238-251 371-382