Miyakogusa Predicted Gene
- Lj2g3v1729190.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LHW1_SOYBN |
809 |
78.1 |
85.7 |
(tr|I1LHW1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G17760.1 |
508 |
53.9 |
73.0 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:5860591-5862301 REVERSE LENGTH=505 |
| Medicago |
Medtr5g020980.1 |
780 |
75.8 |
84.2 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr5:8042933-8046998 | 20130731 |
| Soybean |
Glyma11g07620.1 |
809 |
78.1 |
85.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1729190.1 |
length: 521 aa. |
| IPR003593 |
AAA+ ATPase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0017111 |
nucleoside-triphosphatase activity |
|
|
| HMMSmart |
SM00382 |
ATPases |
2.9e-09 |
253-397 |
| IPR003959 |
ATPase, AAA-type, core |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| HMMPfam |
PF00004 |
AAA |
1.8e-17 |
258-394 |
| IPR003960 |
ATPase, AAA-type, conserved site |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| PatternScan |
PS00674 |
AAA |
NA |
365-383 |
| IPR025753 |
AAA-type ATPase, N-terminal domain |
| HMMPfam |
PF14363 |
AAA_assoc |
9.9e-24 |
34-130 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
5.2e-45 |
208-447 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1e-37 |
234-392 |
| HMMPanther |
PTHR23070 |
BCS1 |
1.5e-220 |
6-497 |
| HMMPanther |
PTHR23070:SF1 |
AAA-TYPE |
1.5e-220 |
6-497 |
| Seg |
seg |
seg |
NA |
482-500 |
- Wolf-PSORT
Lj2g3v1729190.1 chlo 11, nucl 1, plas 1, E.R. 1, nucl_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1729190.1 |
|