Miyakogusa Predicted Gene

Lj2g3v1728900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KGA2_MEDTR 290 50.9 58.2 (tr|G7KGA2) Short internode related sequence OS=Medicago truncatula GN=MTR_5g021130 PE=4 SV=1
TAIR_pep AT3G51060.1 201 38.2 46.9 | Symbols: STY1, SRS1 | Lateral root primordium (LRP) protein-related | chr3:18964606-18966130 FORWARD LENGTH=370
Medicago Medtr5g021130.1 290 50.9 58.2 | transcription factor, putative | HC | chr5:8100971-8103215 | 20130731
Soybean Glyma11g07710.1 233 46.2 51.6  
LJGI gnl|LJGI|FS350628 595 99.7 99.7 similar to UniRef100_A7QE40 Cluster: Chromosome chr4 scaffold_83, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_83, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1728900.1 length: 321 aa.
IPR006510 Zinc finger, lateral root primordium type 1
method AccNumber shortName E-value location
HMMTigr TIGR01623 put_zinc_LRP1: 2.1e-26 113-155
IPR006511 Lateral Root Primordium type 1, C-terminal
HMMTigr TIGR01624 LRP1_Cterm: 4.5e-23 207-254
IPR007818 Protein of unknown function DUF702
HMMPfam PF05142 DUF702 6.3e-61 109-255
no_ID  
HMMPanther PTHR31604 FAMILY 4.8e-71 102-321
Seg seg seg NA 8-14
61-80
97-113
155-173
258-273
Wolf-PSORT
Lj2g3v1728900.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1728900.1