Miyakogusa Predicted Gene
- Lj2g3v1728800.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T8P7_LOTJA |
429 |
90.1 |
90.1 |
(tr|I3T8P7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G51040.3 |
246 |
52.8 |
64.1 |
| Symbols: RTH | RTE1-homolog | chr3:18952281-18953060 REVERSE LENGTH=231 |
| Medicago |
Medtr5g021170.1 |
353 |
74.7 |
79.8 |
| protein reversion-TO-ethylene SENSITIVITY protein | HC | chr5:8129601-8131655 | 20130731 |
| Soybean |
Glyma01g37560.4 |
330 |
73.4 |
78.5 |
|
| LJGI |
gnl|LJGI|TC63375 |
1386 |
100.0 |
100.0 |
similar to UniRef100_Q1HTV3 Cluster: Green ripe-like 2; n=1; Solanum lycopersicum|Rep: Green ripe-like 2 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (83%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1728800.1 |
length: 232 aa. |
| IPR008496 |
Protein of unknown function DUF778 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR20921 |
UNCHARACTERIZED |
2.7e-79 |
8-209 |
| HMMPfam |
PF05608 |
DUF778 |
3.1e-41 |
39-176 |
| no_ID |
|
| HMMPanther |
PTHR20921:SF0 |
SUBFAMILY |
2.7e-79 |
8-209 |
| Seg |
seg |
seg |
NA |
183-205 |
- Wolf-PSORT
Lj2g3v1728800.1 plas 8, E.R. 2, nucl 1, cyto 1, vacu 1, golg 1, cyto_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1728800.1 |
|