database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | K7LNH5_SOYBN | 989 | 79.7 | 84.9 | (tr|K7LNH5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT4G36390.1 | 845 | 74.0 | 85.2 | | Symbols: | Methylthiotransferase | chr4:17194746-17197054 REVERSE LENGTH=640 |
Medicago | Medtr5g021230.1 | 1004 | 79.7 | 85.9 | | radical SAM methylthiotransferase, MiaB/RimO family protein | HC | chr5:8174329-8167505 | 20130731 |
Soybean | Glyma01g37500.1 | 960 | 86.7 | 93.6 | |
LJGI | gnl|LJGI|TC68171 | 1443 | 99.9 | 99.9 | similar to UniRef100_Q8H0V1 Cluster: CDK5RAP1-like protein; n=1; Arabidopsis thaliana|Rep: CDK5RAP1-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (15%) |
Lj2g3v1728760.1 | length: 669 aa. | |||
IPR002792 | TRAM domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
HMMPfam | PF01938 | TRAM | 7.1e-13 | 573-646 |
ProfileScan | PS50926 | TRAM | 14.127 | 573-649 |
IPR005839 | Methylthiotransferase | |||
Molecular Function | GO:0016740 | transferase activity | ||
Biological Process | GO:0043412 | macromolecule modification | ||
Molecular Function | GO:0051539 | 4 iron, 4 sulfur cluster binding | ||
HMMTigr | TIGR00089 | TIGR00089: | 7.4e-115 | 162-644 |
IPR006463 | tRNA-i(6)A37 modification enzyme MiaB | |||
Cellular Component | GO:0005737 | cytoplasm | ||
Biological Process | GO:0006400 | tRNA modification | ||
Molecular Function | GO:0016740 | transferase activity | ||
Molecular Function | GO:0051539 | 4 iron, 4 sulfur cluster binding | ||
HMMTigr | TIGR01574 | miaB-methiolase: | 7.1e-116 | 163-646 |
IPR006638 | Elongator protein 3/MiaB/NifB | |||
Molecular Function | GO:0003824 | catalytic activity | ||
Molecular Function | GO:0051536 | iron-sulfur cluster binding | ||
HMMSmart | SM00729 | Elongator | 4e-52 | 318-559 |
IPR007197 | Radical SAM | |||
Molecular Function | GO:0003824 | catalytic activity | ||
Molecular Function | GO:0051536 | iron-sulfur cluster binding | ||
HMMPfam | PF04055 | Radical_SAM | 1.4e-40 | 322-519 |
IPR013848 | Methylthiotransferase, N-terminal | |||
Molecular Function | GO:0003824 | catalytic activity | ||
Biological Process | GO:0009451 | RNA modification | ||
Molecular Function | GO:0051539 | 4 iron, 4 sulfur cluster binding | ||
HMMPfam | PF00919 | UPF0004 | 1.8e-30 | 162-274 |
ProfileScan | PS51449 | MTTASE_N | 37.039 | 161-290 |
IPR020612 | Methylthiotransferase, conserved site | |||
Molecular Function | GO:0051539 | 4 iron, 4 sulfur cluster binding | ||
PatternScan | PS01278 | MTTASE_RADICAL | NA | 322-342 |
IPR023404 | Radical SAM, alpha/beta horseshoe | |||
Gene3D | G3DSA:3.80.30.20 | no description | 1.5e-82 | 317-572 |
IPR023970 | Methylthiotransferase/radical SAM-type protein | |||
HMMPanther | PTHR11918 | RADICAL | 3.4e-215 | 146-657 |
no_ID | ||||
HMMPanther | PTHR11918:SF41 | SUBFAMILY | 3.4e-215 | 146-657 |
Seg | seg | seg | NA | 29-35 47-60 137-149 410-421 |
superfamily | SSF102114 | Radical | 4.7e-56 | 260-566 |
Lj2g3v1728760.1 chlo 13
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj2g3v1728760.1 |