Miyakogusa Predicted Gene

Lj2g3v1728760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LNH5_SOYBN 989 79.7 84.9 (tr|K7LNH5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G36390.1 845 74.0 85.2 | Symbols: | Methylthiotransferase | chr4:17194746-17197054 REVERSE LENGTH=640
Medicago Medtr5g021230.1 1004 79.7 85.9 | radical SAM methylthiotransferase, MiaB/RimO family protein | HC | chr5:8174329-8167505 | 20130731
Soybean Glyma01g37500.1 960 86.7 93.6  
LJGI gnl|LJGI|TC68171 1443 99.9 99.9 similar to UniRef100_Q8H0V1 Cluster: CDK5RAP1-like protein; n=1; Arabidopsis thaliana|Rep: CDK5RAP1-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1728760.1 length: 669 aa.
IPR002792 TRAM domain
method AccNumber shortName E-value location
HMMPfam PF01938 TRAM 7.1e-13 573-646
ProfileScan PS50926 TRAM 14.127 573-649
IPR005839 Methylthiotransferase
Molecular Function GO:0016740 transferase activity    
Biological Process GO:0043412 macromolecule modification    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMTigr TIGR00089 TIGR00089: 7.4e-115 162-644
IPR006463 tRNA-i(6)A37 modification enzyme MiaB
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006400 tRNA modification    
Molecular Function GO:0016740 transferase activity    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMTigr TIGR01574 miaB-methiolase: 7.1e-116 163-646
IPR006638 Elongator protein 3/MiaB/NifB
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMSmart SM00729 Elongator 4e-52 318-559
IPR007197 Radical SAM
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF04055 Radical_SAM 1.4e-40 322-519
IPR013848 Methylthiotransferase, N-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMPfam PF00919 UPF0004 1.8e-30 162-274
ProfileScan PS51449 MTTASE_N 37.039 161-290
IPR020612 Methylthiotransferase, conserved site
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
PatternScan PS01278 MTTASE_RADICAL NA 322-342
IPR023404 Radical SAM, alpha/beta horseshoe
Gene3D G3DSA:3.80.30.20 no description 1.5e-82 317-572
IPR023970 Methylthiotransferase/radical SAM-type protein
HMMPanther PTHR11918 RADICAL 3.4e-215 146-657
no_ID  
HMMPanther PTHR11918:SF41 SUBFAMILY 3.4e-215 146-657
Seg seg seg NA 29-35
47-60
137-149
410-421
superfamily SSF102114 Radical 4.7e-56 260-566
Wolf-PSORT
Lj2g3v1728760.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1728760.1