Miyakogusa Predicted Gene

Lj2g3v1706520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7VSQ3_MAIZE 261 100.0 100.0 (tr|K7VSQ3) Histone H3 OS=Zea mays GN=ZEAMMB73_433257 PE=4 SV=1
TAIR_pep AT4G40030.2 259 100.0 100.0 | Symbols: | Histone superfamily protein | chr4:18555840-18556827 REVERSE LENGTH=164
Medicago Medtr8g061940.1 259 100.0 100.0 | core histone H2A/H2B/H3/H4 | HC | chr8:25865281-25866119 | 20130731
Soybean Glyma18g01870.1 259 100.0 100.0  
LJGI gnl|LJGI|TC60975 761 100.0 100.0 UniRef100_A5BX39 Cluster: Histone H3; n=4; core eudicotyledons|Rep: Histone H3 - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1706520.1 length: 128 aa.
IPR000164 Histone H3
method AccNumber shortName E-value location
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006334 nucleosome assembly    
FPrintScan PR00622 HISTONEH3 1.1e-79 3-17
17-31
34-55
58-75
80-98
98-114
114-128
HMMPanther PTHR11426 HISTONE 1.8e-128 1-128
HMMSmart SM00428 Histone 9.1e-64 34-128
PatternScan PS00322 HISTONE_H3_1 NA 15-21
PatternScan PS00959 HISTONE_H3_2 NA 67-75
IPR007125 Histone core
Molecular Function GO:0003677 DNA binding    
HMMPfam PF00125 Histone 6e-31 58-128
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 1.5e-79 2-128
superfamily SSF47113 Histone-fold 2.9e-53 2-128
Wolf-PSORT
Lj2g3v1706520.1	nucl 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1706520.1