Miyakogusa Predicted Gene

Lj2g3v1705470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S1P0_LOTJA 139 61.8 61.8 (tr|I3S1P0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G18050.2 72.8 74.5 85.1 | Symbols: HIS1-3 | histone H1-3 | chr2:7846254-7846670 FORWARD LENGTH=138
Medicago Medtr5g021730.1 79.7 83.0 87.2 | linker histone H1 and h5 family protein | HC | chr5:8467951-8467384 | 20130731
Soybean Glyma11g08000.1 91.7 45.7 52.8  
LJGI gnl|LJGI|TC72213 817 100.0 100.0 similar to UniRef100_Q9M4U6 Cluster: Histone H1 variant; n=1; Solanum chilense|Rep: Histone H1 variant - Solanum chilense (Tomato) (Lycopersicon chilense), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1705470.1 length: 140 aa.
IPR005818 Histone H1/H5
method AccNumber shortName E-value location
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
HMMPfam PF00538 Linker_histone 7.6e-09 5-50
ProfileScan PS51504 H15 15.212 1-51
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 6.7e-08 4-55
no_ID  
Seg seg seg NA 52-77
82-93
102-115
superfamily SSF46785 "Winged 4.8e-09 5-58
Wolf-PSORT
Lj2g3v1705470.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1705470.1