Miyakogusa Predicted Gene
- Lj2g3v1695280.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T1T5_LOTJA |
558 |
97.2 |
97.5 |
(tr|I3T1T5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G45600.1 |
366 |
67.6 |
80.5 |
| Symbols: GAS41, TAF14B | YEATS family protein | chr5:18488059-18489666 FORWARD LENGTH=268 |
| Medicago |
Medtr5g021980.1 |
454 |
80.9 |
88.8 |
| YEATS family protein | HC | chr5:8580679-8583227 | 20130731 |
| Soybean |
Glyma11g08110.1 |
477 |
83.3 |
90.6 |
|
| LJGI |
gnl|LJGI|TC69959 |
1667 |
99.8 |
99.8 |
similar to UniRef100_A7QDZ6 Cluster: Chromosome chr4 scaffold_83, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_83, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1695280.1 |
length: 282 aa. |
| IPR005033 |
YEATS |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPanther |
PTHR23195 |
YEATS |
9.9e-73 |
47-226 |
| HMMPfam |
PF03366 |
YEATS |
7.2e-32 |
78-158 |
| ProfileScan |
PS51037 |
YEATS |
24.065 |
56-160 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
12-17 |
- Wolf-PSORT
Lj2g3v1695280.1 nucl 7, pero 3, chlo 1, cyto 1, plas 1, extr 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1695280.1 |
|