Miyakogusa Predicted Gene

Lj2g3v1695250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LYK3_SOYBN 1711 72.0 79.7 (tr|I1LYK3) Structural maintenance of chromosomes protein OS=Glycine max PE=3 SV=2
TAIR_pep AT3G54670.3 1399 59.1 72.0 | Symbols: TTN8 | Structural maintenance of chromosomes (SMC) family protein | chr3:20235818-20243701 FORWARD LENGTH=1239
Medicago Medtr1g069910.1 1643 69.1 79.5 | structural maintenance of chromosomes protein | HC | chr1:30581189-30595745 | 20130731
Soybean Glyma13g18470.1 1700 70.1 77.6  
LJGI gnl|LJGI|TC58572 860 94.7 94.7 similar to UniRef100_A7Q1S8 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1695250.1 length: 1189 aa.
IPR003395 RecF/RecN/SMC
method AccNumber shortName E-value location
HMMPfam PF02463 SMC_N 2.5e-56 10-1172
IPR010935 SMCs flexible hinge
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0051276 chromosome organization    
HMMPfam PF06470 SMC_hinge 1.4e-25 518-632
HMMSmart SM00968 SMC 5.1e-33 518-634
superfamily SSF75553 Smc 3.6e-49 479-683
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.2e-73 8-1179
no_ID  
Coil coil coiled-coil NA 171-233
238-287
326-364
413-441
455-504
676-697
717-745
752-780
830-939
988-1016
Gene3D G3DSA:3.40.50.300 no description 6.3e-38 325-345
1040-1181
HMMPanther PTHR18937 STRUCTURAL 0 1-1187
HMMPanther PTHR18937:SF12 STRUCTURAL 0 1-1187
Seg seg seg NA 173-196
205-218
316-345
653-664
839-848
856-871
Wolf-PSORT
Lj2g3v1695250.1	cyto 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1695250.1