Miyakogusa Predicted Gene

Lj2g3v1670850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K470_SOYBN 513 56.2 62.5 (tr|K7K470) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G35890.1 189 34.0 48.1 | Symbols: | winged-helix DNA-binding transcription factor family protein | chr4:16997433-17000410 FORWARD LENGTH=523
Medicago Medtr5g022790.1 489 53.3 60.8 | ATP synthase, A subunit | HC | chr5:9032818-9026232 | 20130731
Soybean Glyma11g08500.1 481 55.3 61.1  
LJGI gnl|LJGI|TC72923 1110 100.0 100.0 similar to UniRef100_A7R117 Cluster: Chromosome chr4 scaffold_333, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_333, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1670850.1 length: 498 aa.
IPR006630 RNA-binding protein Lupus La
method AccNumber shortName E-value location
HMMPfam PF05383 La 2.6e-22 337-394
HMMSmart SM00715 Domain 2.6e-25 331-407
ProfileScan PS50961 HTH_LA 25.645 327-416
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 4.9e-27 330-410
no_ID  
HMMPanther PTHR22792 LUPUS 8e-47 56-414
HMMPanther PTHR22792:SF24 OS03G0859300 8e-47 56-414
Seg seg seg NA 35-54
57-75
125-146
254-280
294-307
superfamily SSF46785 "Winged 2.7e-29 321-420
Wolf-PSORT
Lj2g3v1670850.1	nucl 10, mito 2, chlo 1, cyto 1, cyto_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1670850.1