Miyakogusa Predicted Gene

Lj2g3v1644380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K447_SOYBN 828 62.4 72.0 (tr|K7K447) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G17580.1 387 43.1 60.7 | Symbols: | Polynucleotide adenylyltransferase family protein | chr2:7646507-7650066 FORWARD LENGTH=757
Medicago Medtr5g023810.1 736 55.5 67.5 | tRNA nucleotidyltransferase/poly(A) polymerase | HC | chr5:9485108-9478063 | 20130731
Soybean Glyma01g36420.1 756 64.8 74.0  
LJGI gnl|LJGI|TC81908 1963 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1644380.1 length: 726 aa.
IPR002646 Poly A polymerase, head domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006396 RNA processing    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF01743 PolyA_pol 2.3e-25 87-217
no_ID  
Gene3D G3DSA:1.10.3090.10 no description 2.5e-23 217-397
Gene3D G3DSA:3.30.460.10 no description 5.1e-34 62-213
HMMPanther PTHR13734 TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) 1.7e-144 51-560
HMMPanther PTHR13734:SF12 POLYNUCLEOTIDE 1.7e-144 51-560
HMMPfam PF12627 PolyA_pol_RNAbd 3.1e-11 245-307
Seg seg seg NA 121-132
288-308
362-372
superfamily SSF81301 Nucleotidyltransferase 1.6e-28 65-215
superfamily SSF81891 Poly 7.2e-26 216-442
Wolf-PSORT
Lj2g3v1644380.1	chlo 5, mito 5, chlo_mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1644380.1