Miyakogusa Predicted Gene

Lj2g3v1643290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K445_SOYBN 1209 83.8 91.4 (tr|K7K445) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G39530.1 432 34.0 56.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:18374736-18377240 REVERSE LENGTH=834
Medicago Medtr5g024100.1 1154 80.9 88.6 | PPR containing plant-like protein | HC | chr5:9654442-9656866 | 20130731
Soybean Glyma01g36350.1 1209 83.8 91.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1643290.1 length: 687 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.91 180-205
209-236
413-442
485-505
585-607
649-676
HMMPfam PF13041 PPR_2 7.3e-14 5-52
107-155
510-558
HMMTigr TIGR00756 PPR: 0.0016 7-41
209-241
413-443
513-546
586-607
ProfileScan PS51375 PPR 9.021 5-39
40-74
107-142
75-106
206-240
175-205
241-275
276-310
410-444
379-409
511-545
480-510
546-581
582-617
645-679
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.9e-13 580-674
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-185 1-685
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.3e-185 1-685
superfamily SSF48452 TPR-like 1.8e-07 485-671
Wolf-PSORT
Lj2g3v1643290.1	chlo 12, nucl 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1643290.1