| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7MQ01_SOYBN | 1471 | 77.6 | 84.6 | (tr|K7MQ01) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G31360.1 | 308 | 41.7 | 58.6 | | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 | chr1:11232422-11237412 FORWARD LENGTH=705 |
| Medicago | Medtr3g063040.1 | 1404 | 75.4 | 83.4 | | ATP-dependent DNA helicase RecQ | HC | chr3:28524625-28534220 | 20130731 |
| Soybean | Glyma18g05570.1 | 572 | 88.4 | 94.7 | |
| LJGI | gnl|LJGI|TC73428 | 1283 | 100.0 | 100.0 | similar to UniRef100_A7NXX6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%) |
| Lj2g3v1643230.1 | length: 912 aa. | |||
| IPR001650 | Helicase, C-terminal | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00271 | Helicase_C | 1.4e-18 | 250-326 |
| HMMSmart | SM00490 | helicase | 7.2e-27 | 245-326 |
| ProfileScan | PS51194 | HELICASE_CTER | 20.722 | 216-380 |
| IPR002121 | HRDC domain | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Cellular Component | GO:0005622 | intracellular | ||
| Gene3D | G3DSA:1.10.150.80 | no description | 1.6e-10 | 547-617 |
| HMMPfam | PF00570 | HRDC | 2.5e-14 | 546-612 |
| HMMSmart | SM00341 | Helicase | 8e-06 | 542-622 |
| ProfileScan | PS50967 | HRDC | 18.744 | 542-622 |
| IPR004589 | DNA helicase, ATP-dependent, RecQ type | |||
| Biological Process | GO:0006310 | DNA recombination | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| HMMTigr | TIGR00614 | recQ_fam: | 1.6e-150 | 6-458 |
| IPR010997 | HRDC-like | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0003824 | catalytic activity | ||
| Biological Process | GO:0044237 | cellular metabolic process | ||
| superfamily | SSF47819 | HRDC-like | 5.7e-16 | 534-628 |
| IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| HMMPfam | PF00270 | DEAD | 3.8e-20 | 19-178 |
| IPR011991 | Winged helix-turn-helix DNA-binding domain | |||
| Gene3D | G3DSA:1.10.10.10 | no description | 6.5e-45 | 340-501 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 2.1e-30 | 13-208 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 22.587 | 25-192 |
| IPR018982 | RQC domain | |||
| Biological Process | GO:0006260 | DNA replication | ||
| Biological Process | GO:0006281 | DNA repair | ||
| Molecular Function | GO:0043140 | ATP-dependent 3'-5' DNA helicase activity | ||
| HMMPfam | PF09382 | RQC | 2.1e-19 | 407-500 |
| HMMSmart | SM00956 | no description | 1.2e-21 | 407-511 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 7.4e-58 | 24-343 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.300 | no description | 5.6e-39 | 3-196 197-339 |
| HMMPanther | PTHR13710 | DNA | 1.1e-249 | 2-671 |
| HMMPanther | PTHR13710:SF11 | DNA | 1.1e-249 | 2-671 |
| Seg | seg | seg | NA | 24-31 543-559 766-781 |
| superfamily | SSF46785 | "Winged | 1.5e-24 | 398-499 |
Lj2g3v1643230.1 cyto 7, nucl 3, chlo 1, plas 1, vacu 1, cysk 1, cysk_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v1643230.1 | Not targeted | -23.744 | -0.834 | -1.534 | 18.58% | -21.376 |