Miyakogusa Predicted Gene

Lj2g3v1633190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K445_SOYBN 1308 82.8 90.5 (tr|K7K445) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G39530.1 454 33.6 56.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:18374736-18377240 REVERSE LENGTH=834
Medicago Medtr5g024100.1 1248 80.6 88.4 | PPR containing plant-like protein | HC | chr5:9654442-9656866 | 20130731
Soybean Glyma01g36350.1 1209 83.8 91.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1633190.1 length: 757 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1 250-275
279-306
483-512
555-575
655-677
719-746
HMMPfam PF13041 PPR_2 8.2e-14 75-122
177-225
580-628
HMMTigr TIGR00756 PPR: 0.0018 77-111
279-311
483-513
583-616
656-677
ProfileScan PS51375 PPR 9.021 75-109
44-74
110-144
177-212
145-176
276-310
245-275
311-345
346-380
480-514
449-479
581-615
550-580
616-651
652-687
715-749
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2e-08 546-603
677-743
no_ID  
HMMPanther PTHR24015 FAMILY 8e-193 30-755
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 8e-193 30-755
superfamily SSF48452 TPR-like 1.8e-07 555-741
Wolf-PSORT
Lj2g3v1633190.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1633190.1