Miyakogusa Predicted Gene

Lj2g3v1613100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LNP1_SOYBN 1186 77.2 85.1 (tr|K7LNP1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G35560.1 769 52.5 69.6 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:16881562-16886878 FORWARD LENGTH=1049
Medicago Medtr8g073335.1 1117 72.1 82.3 | transducin/WD40 repeat protein | HC | chr8:31102699-31113605 | 20130731
Soybean Glyma11g09120.1 1186 77.2 85.1  
LJGI gnl|LJGI|DC593169 1152 100.0 100.0 similar to UniRef100_A7QWN1 Cluster: Chromosome chr4 scaffold_205, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr4 scaffold_205, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1613100.1 length: 760 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00320 WD40 0.65 110-149
220-260
436-481
494-533
561-596
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 4.9e-19 44-151
418-657
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 3.7e-13 360-661
no_ID  
HMMPanther PTHR10241 LETHAL(2) 9.5e-79 4-533
HMMPanther PTHR10241:SF11 LETHAL 9.5e-79 4-533
Seg seg seg NA 350-369
superfamily SSF101908 Putative 5.4e-24 51-537
Wolf-PSORT
Lj2g3v1613100.1	nucl 8, cyto 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1613100.1