Miyakogusa Predicted Gene
- Lj2g3v1601010.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7K439_SOYBN |
963 |
72.2 |
82.4 |
(tr|K7K439) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT4G35520.1 |
409 |
52.0 |
65.0 |
| Symbols: MLH3, ATMLH3 | MUTL protein homolog 3 | chr4:16865488-16871527 FORWARD LENGTH=1169 |
Medicago |
Medtr5g024250.1 |
922 |
68.5 |
78.8 |
| DNA mismatch repair protein, carboxy-terminal domain protein | HC | chr5:9761916-9752005 | 20130731 |
Soybean |
Glyma01g36280.1 |
552 |
64.4 |
72.9 |
|
LJGI |
gnl|LJGI|FS362323 |
825 |
99.5 |
99.5 |
similar to UniRef100_A7QWM7 Cluster: Chromosome chr4 scaffold_205, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_205, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1601010.2 |
length: 681 aa. |
IPR002099 |
DNA mismatch repair protein |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Biological Process |
GO:0006298 |
mismatch repair |
|
|
Molecular Function |
GO:0030983 |
mismatched DNA binding |
|
|
HMMPanther |
PTHR10073 |
DNA |
1.8e-93 |
418-669 |
IPR014790 |
MutL, C-terminal, dimerisation |
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Biological Process |
GO:0006298 |
mismatch repair |
|
|
HMMPfam |
PF08676 |
MutL_C |
7e-12 |
445-606 |
HMMSmart |
SM00853 |
MutL |
4.5e-21 |
446-606 |
no_ID |
|
HMMPanther |
PTHR10073:SF7 |
DNA |
1.8e-93 |
418-669 |
superfamily |
SSF118116 |
DNA |
3.2e-18 |
441-637 |
- Wolf-PSORT
Lj2g3v1601010.2 nucl 9, plas 2, chlo 1, extr 1, cysk 1, golg_plas 1, E.R._plas 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj2g3v1601010.2 |
|