Miyakogusa Predicted Gene

Lj2g3v1589650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K193_MEDTR 1016 79.6 87.7 (tr|G7K193) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g024320 PE=4 SV=1
TAIR_pep AT2G17525.1 773 61.9 79.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:7624178-7626058 FORWARD LENGTH=626
Medicago Medtr5g024320.1 1016 79.6 87.7 | PPR containing plant-like protein | HC | chr5:9792166-9790250 | 20130731
Soybean Glyma01g36240.1 919 84.3 91.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1589650.1 length: 630 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 6.9e-06 82-109
188-218
394-422
433-458
500-529
HMMPfam PF13041 PPR_2 1.7e-11 220-265
322-370
535-579
HMMTigr TIGR00756 PPR: 1e-07 188-222
223-250
254-287
324-358
360-392
394-423
433-457
500-531
535-568
570-602
ProfileScan PS51375 PPR 11.729 80-110
116-150
151-185
186-220
252-286
221-251
287-321
322-356
357-391
392-426
429-459
497-531
462-496
532-566
567-601
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-06 431-596
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-141 33-620
HMMPanther PTHR24015:SF0 SUBFAMILY 1.4e-141 33-620
Seg seg seg NA 33-43
Wolf-PSORT
Lj2g3v1589650.1	chlo 8, mito 2, extr 2, nucl 1, plas 1, cyto_mito 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1589650.1