Miyakogusa Predicted Gene
- Lj2g3v1586470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K430_SOYBN |
308 |
66.0 |
75.0 |
(tr|K7K430) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G36290.1 |
75.9 |
35.6 |
54.1 |
| Symbols: CRT1 | compromised recognition of TCV 1 | chr4:17169669-17173187 REVERSE LENGTH=635 |
| Medicago |
Medtr5g024810.1 |
402 |
65.6 |
74.8 |
| CW-type zinc finger protein | HC | chr5:10011299-9997842 | 20130731 |
| Soybean |
Glyma01g36090.1 |
134 |
66.4 |
75.5 |
|
| LJGI |
gnl|LJGI|FS322615 |
321 |
97.8 |
97.8 |
UniRef100_Q14687 Cluster: Genetic suppressor element 1; n=2; Homo sapiens|Rep: Genetic suppressor element 1 - Homo, partial (1%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1586470.1 |
length: 397 aa. |
| IPR003594 |
Histidine kinase-like ATPase, ATP-binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Gene3D |
G3DSA:3.30.565.10 |
no description |
3.7e-19 |
208-351 |
| superfamily |
SSF55874 |
ATPase |
2.2e-16 |
175-335 |
| no_ID |
|
| HMMPanther |
PTHR23336 |
ZINC |
5e-57 |
3-314 |
| HMMPanther |
PTHR23336:SF8 |
SUBFAMILY |
5e-57 |
3-314 |
| HMMPfam |
PF13589 |
HATPase_c_3 |
7.6e-23 |
208-309 |
- Wolf-PSORT
Lj2g3v1586470.1 cyto 9, nucl 2, mito 1, vacu 1, cysk 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1586470.1 |
|