Miyakogusa Predicted Gene

Lj2g3v1575320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7N0N6_SOYBN 1007 79.0 88.0 (tr|K7N0N6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G15820.1 728 57.2 74.9 | Symbols: OTP51 | endonucleases | chr2:6888734-6891360 REVERSE LENGTH=849
Medicago Medtr1g026035.1 987 78.7 86.2 | PPR containing plant-like protein | HC | chr1:8385143-8388094 | 20130731
Soybean Glyma07g29520.1 880 74.0 84.1  
LJGI gnl|LJGI|FS338300 127 100.0 100.0 similar to UniRef100_A7P9F7 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1575320.1 length: 610 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.21 206-225
304-330
340-365
HMMTigr TIGR00756 PPR: 0.00013 304-328
ProfileScan PS51375 PPR 7.673 10-44
45-82
162-196
232-266
197-227
301-331
337-371
IPR004860 Homing endonuclease, LAGLIDADG
Molecular Function GO:0004519 endonuclease activity    
HMMPfam PF03161 LAGLIDADG_2 2e-24 402-569
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.5e-05 269-327
IPR027434 Homing endonuclease
Molecular Function GO:0004519 endonuclease activity    
Gene3D G3DSA:3.10.28.10 no description 3.9e-17 374-491
492-583
superfamily SSF55608 Homing 7.3e-31 390-585
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-42 1-362
Seg seg seg NA 171-183
405-416
Wolf-PSORT
Lj2g3v1575320.1	cyto 6, chlo 3, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1575320.1