Miyakogusa Predicted Gene

Lj2g3v1572000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LIE8_SOYBN 1479 80.9 87.4 (tr|I1LIE8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G65930.2 1111 65.3 77.1 | Symbols: ZWI, PKCBP, KCBP | kinesin-like calmodulin-binding protein (ZWICHEL) | chr5:26370369-26376394 REVERSE LENGTH=1260
Medicago Medtr5g025100.1 1417 77.7 85.6 | kinesin-like calmodulin-binding protein | HC | chr5:10163341-10154961 | 20130731
Soybean Glyma01g35950.1 1445 80.5 86.5  
LJGI gnl|LJGI|TC79151 739 85.9 85.9 similar to UniRef100_A7QSP8 Cluster: Chromosome chr4 scaffold_162, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_162, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1572000.1 length: 887 aa.
IPR000299 FERM domain
method AccNumber shortName E-value location
Cellular Component GO:0005856 cytoskeleton    
ProfileScan PS50057 FERM_3 34.443 281-595
IPR000857 MyTH4 domain
Cellular Component GO:0005856 cytoskeleton    
HMMPfam PF00784 MyTH4 5e-36 163-275
HMMSmart SM00139 Domain 5.3e-33 117-276
ProfileScan PS51016 MYTH4 51.226 117-276
IPR011254 Prismane-like
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF56821 Prismane 1.9e-07 834-886
IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle
Gene3D G3DSA:1.20.80.10 no description 2.7e-15 394-495
IPR018979 FERM, N-terminal
HMMPfam PF09379 FERM_N 8.3e-09 285-383
IPR019748 FERM central domain
HMMPfam PF00373 FERM_M 7.6e-12 390-501
superfamily SSF47031 Second 3.6e-20 379-497
IPR019749 Band 4.1 domain
HMMSmart SM00295 Band 5.1e-36 277-501
no_ID  
Coil coil coiled-coil NA 619-668
734-776
791-850
HMMPanther PTHR13140 MYOSIN 3.9e-20 112-533
HMMPanther PTHR13140:SF27 MYOSIN 3.9e-20 112-533
Seg seg seg NA 510-522
644-655
825-846
superfamily SSF50729 PH 5.8e-15 497-591
Wolf-PSORT
Lj2g3v1572000.1	chlo 6, cyto 4, nucl 1, mito 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1572000.1