Miyakogusa Predicted Gene
- Lj2g3v1550670.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LNS4_SOYBN |
1135 |
87.1 |
92.9 |
(tr|K7LNS4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G35610.1 |
960 |
73.7 |
85.2 |
| Symbols: XEG113 | xyloglucanase 113 | chr2:14947617-14951106 REVERSE LENGTH=644 |
| Medicago |
Medtr5g025590.1 |
1108 |
87.1 |
91.6 |
| nucleotide-diphospho-sugar transferase family protein | HC | chr5:10393372-10386583 | 20130731 |
| Soybean |
Glyma01g35690.1 |
1113 |
85.8 |
91.1 |
|
| LJGI |
gnl|LJGI|TC70546 |
954 |
90.4 |
90.4 |
similar to UniRef100_A7QKM2 Cluster: Chromosome chr2 scaffold_113, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_113, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1550670.1 |
length: 619 aa. |
| IPR003388 |
Reticulon |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005783 |
endoplasmic reticulum |
|
|
| HMMPanther |
PTHR10994 |
RETICULON |
2.8e-177 |
1-438 |
| IPR005069 |
Nucleotide-diphospho-sugar transferase |
| HMMPfam |
PF03407 |
Nucleotid_trans |
2.2e-55 |
146-370 |
| no_ID |
|
| HMMPanther |
PTHR10994:SF44 |
SUBFAMILY |
2.8e-177 |
1-438 |
- Wolf-PSORT
Lj2g3v1550670.1 cyto 3, plas 3, cyto_plas 3, nucl 2, E.R. 2, cyto_pero 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1550670.1 |
|