Miyakogusa Predicted Gene
- Lj2g3v1550550.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SA02_LOTJA |
314 |
86.8 |
87.4 |
(tr|I3SA02) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G31720.1 |
128 |
44.4 |
63.2 |
| Symbols: | Protein of unknown function (DUF1218) | chr1:11356169-11356960 FORWARD LENGTH=194 |
| Medicago |
Medtr5g025640.1 |
234 |
64.8 |
74.3 |
| transmembrane protein, putative | HC | chr5:10447134-10444989 | 20130731 |
| Soybean |
Glyma01g35630.1 |
224 |
73.8 |
85.9 |
|
| LJGI |
gnl|LJGI|TC60791 |
1086 |
99.8 |
99.8 |
similar to UniRef100_Q75CX0 Cluster: ACL204Wp; n=1; Eremothecium gossypii|Rep: ACL204Wp - Ashbya gossypii (Yeast) (Eremothecium gossypii), partial (7%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1550550.1 |
length: 182 aa. |
| IPR009606 |
Protein of unknown function DUF1218 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06749 |
DUF1218 |
2.4e-16 |
62-156 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
9-30 |
- Wolf-PSORT
Lj2g3v1550550.1 chlo 7, nucl 2, cyto 1, plas 1, vacu 1, E.R. 1, golg 1, cysk_nucl 1, golg_plas 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1550550.1 |
|