Miyakogusa Predicted Gene
- Lj2g3v1550150.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L598_SOYBN |
650 |
79.9 |
89.1 |
(tr|I1L598) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G31500.1 |
443 |
59.3 |
70.7 |
| Symbols: | DNAse I-like superfamily protein | chr1:11273821-11276534 REVERSE LENGTH=388 |
| Medicago |
Medtr5g026280.1 |
645 |
80.2 |
87.8 |
| carbon catabolite repressor-like protein | HC | chr5:10804381-10809090 | 20130731 |
| Soybean |
Glyma09g35040.1 |
650 |
79.9 |
89.1 |
|
| LJGI |
gnl|LJGI|GO024489 |
1368 |
99.7 |
99.7 |
similar to UniRef100_A7QKQ2 Cluster: Chromosome chr2 scaffold_113, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_113, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1550150.2 |
length: 393 aa. |
| IPR005135 |
Endonuclease/exonuclease/phosphatase |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.60.10.10 |
no description |
2.6e-10 |
204-290 |
| HMMPfam |
PF03372 |
Exo_endo_phos |
8.6e-20 |
58-381 |
| superfamily |
SSF56219 |
DNase |
5.3e-38 |
52-390 |
| no_ID |
|
| HMMPanther |
PTHR12121 |
CARBON |
5e-148 |
52-393 |
| HMMPanther |
PTHR12121:SF10 |
CARBON |
5e-148 |
52-393 |
- Wolf-PSORT
Lj2g3v1550150.2 chlo 8, mito 3, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1550150.2 |
|