Miyakogusa Predicted Gene

Lj2g3v1550110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LGU0_SOYBN 1110 76.7 85.6 (tr|K7LGU0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G71490.1 785 56.5 75.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:26933326-26935371 REVERSE LENGTH=681
Medicago Medtr5g008690.1 992 71.4 82.8 | PPR containing plant-like protein | HC | chr5:1878296-1873339 | 20130731
Soybean Glyma10g01540.1 1109 78.0 87.2  
LJGI gnl|LJGI|FS318804 212 82.8 82.8 similar to UniRef100_A8JIG9 Cluster: Cytochrome P450; n=1; Chlamydomonas reinhardtii|Rep: Cytochrome P450 - Chlamydomonas reinhardtii, partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1550110.1 length: 685 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00018 182-209
248-274
319-346
420-446
HMMPfam PF13041 PPR_2 1.2e-08 113-155
210-246
346-388
447-494
HMMTigr TIGR00756 PPR: 2.2e-08 113-145
182-209
212-245
248-274
319-346
347-380
420-446
449-482
ProfileScan PS51375 PPR 5.996 109-143
210-244
179-209
245-275
345-379
314-344
279-313
447-481
416-446
482-517
518-552
584-618
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.7e-09 577-603
no_ID  
HMMPanther PTHR24015 FAMILY 5.1e-258 56-680
HMMPanther PTHR24015:SF164SUBFAMILY NOT 5.1e-258 56-680
Seg seg seg NA 42-52
666-677
Wolf-PSORT
Lj2g3v1550110.1	chlo 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1550110.1