Miyakogusa Predicted Gene

Lj2g3v1550050.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SCN2_LOTJA 358 74.5 74.5 (tr|I3SCN2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G31460.1 67.0 53.3 63.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). | chr1:11261705-11262610 REVERSE LENGTH=301

Medicago Medtr5g026390.1 131 36.4 45.5 | hypothetical protein | HC | chr5:10852509-10853875 | 20130731

Soybean Glyma01g35410.1 104 38.0 46.5

LJGI gnl|LJGI|GO012259 436 99.6 99.6 weakly similar to UniRef100_A7QVY9 Cluster: Chromosome chr2 scaffold_196, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_196, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1550050.1 length: 251 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 21-33
122-147
173-181
208-220

Wolf-PSORT

Lj2g3v1550050.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1550050.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SCN2_LOTJA	358	74.5	74.5	(tr\|I3SCN2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G31460.1	67.0	53.3	63.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). \| chr1:11261705-11262610 REVERSE LENGTH=301
Medicago	Medtr5g026390.1	131	36.4	45.5	\| hypothetical protein \| HC \| chr5:10852509-10853875 \| 20130731
Soybean	Glyma01g35410.1	104	38.0	46.5
LJGI	gnl\|LJGI\|GO012259	436	99.6	99.6	weakly similar to UniRef100_A7QVY9 Cluster: Chromosome chr2 scaffold_196, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_196, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

no_ID
Lj2g3v1550050.1				length: 251 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	21-33 122-147 173-181 208-220