Miyakogusa Predicted Gene

Lj2g3v1550040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J846_SOYBN 666 87.3 95.0 (tr|I1J846) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G34660.1 355 49.6 68.9 | Symbols: | SH3 domain-containing protein | chr4:16545595-16548294 REVERSE LENGTH=368
Medicago Medtr5g026400.4 625 82.5 91.0 | clathrin-binding protein | HC | chr5:10861039-10855512 | 20130731
Soybean Glyma01g35400.1 666 87.3 95.0  
LJGI gnl|LJGI|TC79930 1223 99.8 99.8 similar to UniRef100_A7QVZ5 Cluster: Chromosome chr2 scaffold_196, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_196, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1550040.1 length: 362 aa.
IPR001452 Src homology-3 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00326 Src 1e-14 298-353
ProfileScan PS50002 SH3 10.911 295-354
superfamily SSF50044 SH3-domain 7.7e-15 291-358
IPR011511 Variant SH3
HMMPfam PF07653 SH3_2 2.2e-07 300-350
IPR027267 Arfaptin homology (AH) domain/BAR domain
Gene3D G3DSA:1.20.1270.60 no description 0.00085 61-256
no_ID  
Coil coil coiled-coil NA 1-22
148-180
189-210
Gene3D G3DSA:2.30.30.40 no description 3.9e-14 299-350
HMMPanther PTHR22820 SH2 2.5e-47 107-357
HMMPanther PTHR22820:SF9 UNCHARACTERIZED 2.5e-47 107-357
superfamily SSF103657 BAR/IMD 2.3e-22 40-254
Wolf-PSORT
Lj2g3v1550040.1	nucl 6, nucl_plas 5, cyto 4, plas 2, cyto_pero 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1550040.1