Miyakogusa Predicted Gene

Lj2g3v1510880.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1J4M8_SOYBN 1072 81.8 85.2 (tr|I1J4M8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G31930.3 773 80.7 86.6 | Symbols: XLG3 | extra-large GTP-binding protein 3 | chr1:11465832-11468961 FORWARD LENGTH=848

Medicago Medtr5g027970.2 978 76.6 80.7 | extra-large GTP-binding protein | HC | chr5:11688213-11683023 | 20130731

Soybean Glyma01g01470.1 1072 81.8 85.2

LJGI gnl|LJGI|FS326984 1029 99.1 99.1 similar to UniRef100_A7PBZ1 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1510880.1 length: 643 aa.

IPR001019 Guanine nucleotide binding protein (G-protein), alpha subunit

method AccNumber shortName E-value location

Molecular Function GO:0003924 GTPase activity

Molecular Function GO:0004871 signal transducer activity

Biological Process GO:0007186 G-protein coupled receptor signaling pathway

Molecular Function GO:0019001 guanyl nucleotide binding

Molecular Function GO:0031683 G-protein beta/gamma-subunit complex binding

HMMPanther PTHR10218 GTP-BINDING 8.9e-217 133-637

HMMPfam PF00503 G-alpha 4.6e-36 437-627

HMMSmart SM00275 G 0.0025 430-643

IPR011025 G protein alpha subunit, helical insertion

Molecular Function GO:0004871 signal transducer activity

Biological Process GO:0007165 signal transduction

Gene3D G3DSA:1.10.400.10 no description 3.7e-29 534-621

superfamily SSF47895 Transducin 4.6e-22 469-625

no_ID

HMMPanther PTHR10218:SF90 XLG 8.9e-217 133-637

Seg seg seg NA 97-110
113-143
160-173
438-451

Wolf-PSORT

Lj2g3v1510880.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1510880.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1J4M8_SOYBN	1072	81.8	85.2	(tr\|I1J4M8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G31930.3	773	80.7	86.6	\| Symbols: XLG3 \| extra-large GTP-binding protein 3 \| chr1:11465832-11468961 FORWARD LENGTH=848
Medicago	Medtr5g027970.2	978	76.6	80.7	\| extra-large GTP-binding protein \| HC \| chr5:11688213-11683023 \| 20130731
Soybean	Glyma01g01470.1	1072	81.8	85.2
LJGI	gnl\|LJGI\|FS326984	1029	99.1	99.1	similar to UniRef100_A7PBZ1 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

IPR001019	Guanine nucleotide binding protein (G-protein), alpha subunit
Lj2g3v1510880.1				length: 643 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003924	GTPase activity
Molecular Function	GO:0004871	signal transducer activity
Biological Process	GO:0007186	G-protein coupled receptor signaling pathway
Molecular Function	GO:0019001	guanyl nucleotide binding
Molecular Function	GO:0031683	G-protein beta/gamma-subunit complex binding
HMMPanther	PTHR10218	GTP-BINDING	8.9e-217	133-637
HMMPfam	PF00503	G-alpha	4.6e-36	437-627
HMMSmart	SM00275	G	0.0025	430-643
IPR011025	G protein alpha subunit, helical insertion
Molecular Function	GO:0004871	signal transducer activity
Biological Process	GO:0007165	signal transduction
Gene3D	G3DSA:1.10.400.10	no description	3.7e-29	534-621
superfamily	SSF47895	Transducin	4.6e-22	469-625
no_ID
HMMPanther	PTHR10218:SF90	XLG	8.9e-217	133-637
Seg	seg	seg	NA	97-110 113-143 160-173 438-451