Miyakogusa Predicted Gene

Lj2g3v1510870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J4M9_SOYBN 1023 80.3 88.3 (tr|I1J4M9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G31920.1 669 56.0 74.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:11461864-11463684 REVERSE LENGTH=606
Medicago Medtr5g027980.1 766 80.7 91.7 | pentatricopeptide (PPR) repeat protein | HC | chr5:11695650-11697815 | 20130731
Soybean Glyma01g01480.1 957 81.1 88.4  
LJGI gnl|LJGI|GO028911 1651 98.1 98.1 similar to UniRef100_A7PBZ3 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1510870.1 length: 605 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.013 170-196
199-227
272-297
300-330
335-361
373-396
HMMTigr TIGR00756 PPR: 0.00098 272-297
300-333
335-369
ProfileScan PS51375 PPR 7.114 95-129
130-164
165-199
298-332
267-297
333-368
369-399
435-469
no_ID  
HMMPanther PTHR24015 FAMILY 8.1e-238 24-605
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 8.1e-238 24-605
HMMPfam PF14432 DYW_deaminase 1.1e-11 483-595
Seg seg seg NA 112-125
Wolf-PSORT
Lj2g3v1510870.1	chlo 7, mito 4, nucl 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1510870.1