Miyakogusa Predicted Gene

Lj2g3v1510850.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KI78_SOYBN 587 76.6 86.1 (tr|I1KI78) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G03380.1 224 36.1 55.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:1028292-1030361 FORWARD LENGTH=689
Medicago Medtr8g479320.2 582 76.6 86.8 | PPR containing plant-like protein | HC | chr8:33809079-33805443 | 20130731
Soybean Glyma07g07450.1 562 79.6 88.3  
LJGI gnl|LJGI|FS332255 1122 99.8 99.8 similar to UniRef100_A7R496 Cluster: Chromosome undetermined scaffold_635, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_635, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1510850.2 length: 411 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 1.4e-06 329-349
357-383
HMMPfam PF13041 PPR_2 7.1e-10 152-198
253-301
HMMTigr TIGR00756 PPR: 0.00011 154-188
256-289
357-391
ProfileScan PS51375 PPR 5.546 86-120
152-186
121-151
187-222
254-288
223-253
355-390
324-354
289-323
no_ID  
HMMPanther PTHR24015 FAMILY 2.1e-112 56-411
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 2.1e-112 56-411
Wolf-PSORT
Lj2g3v1510850.2	nucl 6, cyto 4, chlo 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1510850.2