Miyakogusa Predicted Gene
- Lj2g3v1510840.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7K168_SOYBN |
627 |
80.1 |
84.5 |
(tr|K7K168) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G32160.1 |
392 |
58.4 |
71.7 |
| Symbols: | Protein of unknown function (DUF760) | chr1:11568701-11570241 FORWARD LENGTH=406 |
| Medicago |
Medtr5g028020.1 |
585 |
72.8 |
80.0 |
| plant/F3C3-6 protein | HC | chr5:11708806-11712504 | 20130731 |
| Soybean |
Glyma01g01600.1 |
627 |
80.1 |
84.5 |
|
| LJGI |
gnl|LJGI|TC66845 |
2395 |
99.3 |
99.3 |
similar to UniRef100_A7PC12 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (72%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1510840.1 |
length: 411 aa. |
| IPR008479 |
Protein of unknown function DUF760 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05542 |
DUF760 |
1.9e-25 |
138-265 |
| no_ID |
|
| HMMPanther |
PTHR31808 |
FAMILY |
7.7e-135 |
1-411 |
| HMMPanther |
PTHR31808:SF0 |
SUBFAMILY |
7.7e-135 |
1-411 |
| Seg |
seg |
seg |
NA |
141-152 |
- Wolf-PSORT
Lj2g3v1510840.1 plas 4.5, golg 4, E.R._plas 3.5, chlo 3, E.R. 1.5, chlo_mito 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1510840.1 |
|