Miyakogusa Predicted Gene

Lj2g3v1510660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JP21_SOYBN 1381 69.4 79.3 (tr|I1JP21) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G31320.1 1139 59.3 72.0 | Symbols: PARP2, ATPARP2 | poly(ADP-ribose) polymerase 2 | chr2:13354046-13359578 REVERSE LENGTH=983
Medicago Medtr7g096520.1 1406 69.1 79.5 | poly(ADP-ribose) polymerase domain protein | HC | chr7:38717459-38726932 | 20130731
Soybean Glyma19g34580.1 1378 69.3 79.1  
LJGI gnl|LJGI|TC71686 936 100.0 100.0 similar to UniRef100_Q9ZP54 Cluster: Poly [ADP-ribose] polymerase 1 (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1); n=1; Arabidopsis thaliana|Rep: Poly [ADP-ribose] polymerase 1 (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) - Arabidopsis thaliana (Mouse-ear cress), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1510660.1 length: 959 aa.
IPR001357 BRCT domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.10190 no description 3.7e-15 381-468
HMMPfam PF00533 BRCT 1.7e-11 383-455
HMMSmart SM00292 breast 5.3e-13 380-458
ProfileScan PS50172 BRCT 14.564 378-468
superfamily SSF52113 BRCT 1.6e-20 376-469
IPR001510 Zinc finger, PARP-type
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.1740.10 no description 3.8e-18 5-97
102-191
HMMPfam PF00645 zf-PARP 1.5e-15 13-90
109-181
ProfileScan PS50064 PARP_ZN_FINGER_2 12.837 10-93
106-186
IPR004102 Poly(ADP-ribose) polymerase, regulatory domain
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity    
Biological Process GO:0006471 protein ADP-ribosylation    
Gene3D G3DSA:1.20.142.10 no description 1.8e-39 585-741
HMMPfam PF02877 PARP_reg 3e-32 613-736
ProfileScan PS51060 PARP_ALPHA_HD 35.008 612-730
superfamily SSF47587 Domain 1.3e-34 612-743
IPR008288 NAD+ ADP-ribosyltransferase
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006471 protein ADP-ribosylation    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0051287 NAD binding    
HMMPIR PIRSF000489 Poly(ADP-ribose) 0 1-959
IPR008893 WGR domain
HMMPfam PF05406 WGR 1.3e-12 503-581
HMMSmart SM00773 Proposed 1.1e-20 505-585
superfamily SSF142921 WGR 5.4e-30 470-595
IPR012317 Poly(ADP-ribose) polymerase, catalytic domain
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity    
Gene3D G3DSA:3.90.228.10 no description 3.4e-65 743-956
HMMPfam PF00644 PARP 2.6e-67 742-955
ProfileScan PS51059 PARP_CATALYTIC 82.689 733-959
IPR012982 PADR1
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity    
Cellular Component GO:0005634 nucleus    
HMMPfam PF08063 PADR1 8.5e-20 291-342
no_ID  
HMMPanther PTHR15447 POLY 4.7e-244 3-959
Seg seg seg NA 169-182
superfamily SSF56399 ADP-ribosylation 1.7e-68 742-959
superfamily SSF57716 Glucocorticoid 1.8e-18 5-100
101-205
Wolf-PSORT
Lj2g3v1510660.1	nucl 8, chlo 3, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1510660.1