Miyakogusa Predicted Gene

Lj2g3v1510620.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1J4P8_SOYBN 568 80.8 84.5 (tr|I1J4P8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G35530.1 409 62.3 72.8 | Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409

Medicago Medtr5g028850.1 540 77.2 82.9 | bZIP transcription factor family protein | HC | chr5:12068444-12075181 | 20130731

Soybean Glyma01g01740.1 568 80.8 84.5

LJGI gnl|LJGI|TC72276 1350 99.9 99.9 similar to UniRef100_Q94KA7 Cluster: BZIP transcription factor 3; n=1; Phaseolus vulgaris|Rep: BZIP transcription factor 3 - Phaseolus vulgaris (Kidney bean) (French bean), partial (58%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1510620.1 length: 384 aa.

IPR004827 Basic-leucine zipper domain

method AccNumber shortName E-value location

Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity

Biological Process GO:0006355 regulation of transcription, DNA-dependent

Molecular Function GO:0043565 sequence-specific DNA binding

HMMPfam PF00170 bZIP_1 4e-19 302-364

HMMSmart SM00338 basic 7.4e-22 302-366

PatternScan PS00036 BZIP_BASIC NA 309-324

ProfileScan PS50217 BZIP 13.128 304-367

IPR012900 G-box binding, MFMR

Molecular Function GO:0003677 DNA binding

Cellular Component GO:0005634 nucleus

Biological Process GO:0006351 transcription, DNA-dependent

Biological Process GO:0006355 regulation of transcription, DNA-dependent

HMMPfam PF07777 MFMR 6.4e-67 1-195

no_ID

Coil coil coiled-coil NA 322-371

Gene3D G3DSA:1.20.5.170 no description 2.5e-16 295-361

HMMPanther PTHR22952 CAMP-RESPONSE 3.6e-127 49-371

HMMPanther PTHR22952:SF47 OS01G0808100 3.6e-127 49-371

Seg seg seg NA 8-33
173-187
239-250

Wolf-PSORT

Lj2g3v1510620.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1510620.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1J4P8_SOYBN	568	80.8	84.5	(tr\|I1J4P8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G35530.1	409	62.3	72.8	\| Symbols: bZIP16, AtbZIP16 \| basic region/leucine zipper transcription factor 16 \| chr2:14923280-14926025 REVERSE LENGTH=409
Medicago	Medtr5g028850.1	540	77.2	82.9	\| bZIP transcription factor family protein \| HC \| chr5:12068444-12075181 \| 20130731
Soybean	Glyma01g01740.1	568	80.8	84.5
LJGI	gnl\|LJGI\|TC72276	1350	99.9	99.9	similar to UniRef100_Q94KA7 Cluster: BZIP transcription factor 3; n=1; Phaseolus vulgaris\|Rep: BZIP transcription factor 3 - Phaseolus vulgaris (Kidney bean) (French bean), partial (58%)

IPR004827	Basic-leucine zipper domain
Lj2g3v1510620.1				length: 384 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003700	sequence-specific DNA binding transcription factor activity
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
Molecular Function	GO:0043565	sequence-specific DNA binding
HMMPfam	PF00170	bZIP_1	4e-19	302-364
HMMSmart	SM00338	basic	7.4e-22	302-366
PatternScan	PS00036	BZIP_BASIC	NA	309-324
ProfileScan	PS50217	BZIP	13.128	304-367
IPR012900	G-box binding, MFMR
Molecular Function	GO:0003677	DNA binding
Cellular Component	GO:0005634	nucleus
Biological Process	GO:0006351	transcription, DNA-dependent
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
HMMPfam	PF07777	MFMR	6.4e-67	1-195
no_ID
Coil	coil	coiled-coil	NA	322-371
Gene3D	G3DSA:1.20.5.170	no description	2.5e-16	295-361
HMMPanther	PTHR22952	CAMP-RESPONSE	3.6e-127	49-371
HMMPanther	PTHR22952:SF47	OS01G0808100	3.6e-127	49-371
Seg	seg	seg	NA	8-33 173-187 239-250