Miyakogusa Predicted Gene

Lj2g3v1509500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LF38_SOYBN 1377 79.1 85.1 (tr|K7LF38) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G46910.1 859 58.5 69.8 | Symbols: | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | chr5:19046888-19050880 FORWARD LENGTH=787
Medicago Medtr5g029370.2 1278 76.2 83.6 | transcription factor jumonji family protein | HC | chr5:12301732-12307715 | 20130731
Soybean Glyma09g34040.1 1045 73.4 78.4  
LJGI gnl|LJGI|CB828057 1021 99.8 99.8 similar to UniRef100_A7PC31 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1509500.1 length: 843 aa.
IPR003347 JmjC domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02373 JmjC 2e-39 254-377
HMMSmart SM00558 A 7.7e-51 221-394
ProfileScan PS51184 JMJC 37.795 224-394
IPR003349 Transcription factor jumonji, JmjN
HMMPfam PF02375 JmjN 8e-15 78-110
HMMSmart SM00545 Small 6.8e-15 76-117
ProfileScan PS51183 JMJN 13.910 77-118
IPR004198 Zinc finger, C5HC2-type
Cellular Component GO:0005634 nucleus    
HMMPfam PF02928 zf-C5HC2 4.2e-08 474-524
no_ID  
Coil coil coiled-coil NA 513-544
HMMPanther PTHR10694 JUMONJI 8.9e-137 66-546
HMMPanther PTHR10694:SF8 RETINOBLASTOMA 8.9e-137 66-546
Seg seg seg NA 619-632
superfamily SSF51197 Clavaminate 5.6e-30 155-420
Wolf-PSORT
Lj2g3v1509500.1	nucl 10, cyto 2, plas 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1509500.1