Miyakogusa Predicted Gene
- Lj2g3v1472980.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MW61_SOYBN |
230 |
91.6 |
96.6 |
(tr|I1MW61) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G16715.1 |
199 |
77.3 |
92.4 |
| Symbols: EMB2247 | ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases | chr5:5485353-5493229 FORWARD LENGTH=974 |
| Medicago |
Medtr6g027620.1 |
223 |
88.2 |
95.8 |
| valyl-tRNA synthetase/valine-tRNA ligase | HC | chr6:9605327-9589286 | 20130731 |
| Soybean |
Glyma17g23940.1 |
230 |
91.6 |
96.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1472980.1 |
length: 119 aa. |
| IPR002300 |
Aminoacyl-tRNA synthetase, class Ia |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0004812 |
aminoacyl-tRNA ligase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006418 |
tRNA aminoacylation for protein translation |
|
|
| HMMPfam |
PF00133 |
tRNA-synt_1 |
2.3e-08 |
1-39 |
| IPR002303 |
Valine-tRNA ligase |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0004832 |
valine-tRNA ligase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Biological Process |
GO:0006438 |
valyl-tRNA aminoacylation |
|
|
| HMMPanther |
PTHR11946:SF5 |
VALYL-TRNA |
8.5e-34 |
1-119 |
| IPR009080 |
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding |
| Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
| Molecular Function |
GO:0004812 |
aminoacyl-tRNA ligase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006418 |
tRNA aminoacylation for protein translation |
|
|
| superfamily |
SSF47323 |
Anticodon-binding |
2e-06 |
50-119 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.730.10 |
no description |
7e-25 |
1-118 |
| HMMPanther |
PTHR11946 |
ISOLEUCYL, |
8.5e-34 |
1-119 |
| superfamily |
SSF52374 |
Nucleotidylyl |
1.1e-13 |
1-56 |
- Wolf-PSORT
Lj2g3v1472980.1 nucl_plas 4.5, nucl 4, chlo 3, plas 3, cyto 2.5, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1472980.1 |
|