Miyakogusa Predicted Gene

Lj2g3v1471890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJV5_LOTJA 464 81.8 81.8 (tr|I3SJV5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G35410.1 233 54.0 68.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:14898341-14899590 FORWARD LENGTH=308
Medicago Medtr5g030020.1 259 53.7 62.5 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr5:12627820-12622359 | 20130731
Soybean Glyma09g33790.1 303 57.8 64.5  
LJGI gnl|LJGI|TC61191 1659 99.1 99.1 similar to UniRef100_A7PC82 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1471890.1 length: 285 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.3e-12 184-254
HMMSmart SM00360 RNA 2.4e-14 87-159
183-257
ProfileScan PS50102 RRM 15.306 86-163
182-261
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 6.8e-18 71-165
166-264
no_ID  
HMMPanther PTHR24012 FAMILY 3.1e-66 64-259
HMMPanther PTHR24012:SF151SUBFAMILY NOT 3.1e-66 64-259
HMMPfam PF14259 RRM_6 2.9e-21 88-154
Seg seg seg NA 32-50
62-81
167-178
superfamily SSF54928 RNA-binding 1.7e-38 85-262
Wolf-PSORT
Lj2g3v1471890.1	chlo 6, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1471890.1