Miyakogusa Predicted Gene

Lj2g3v1468380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5H3_LOTJA 210 100.0 100.0 (tr|I3S5H3) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT1G12300.1 85.1 41.8 63.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:4184163-4186076 REVERSE LENGTH=637
Medicago Medtr7g012890.1 108 61.0 75.3 | pentatricopeptide (PPR) repeat protein | LC | chr7:3641843-3643495 | 20130731
Soybean Glyma09g30550.1 113 62.0 74.7  
LJGI gnl|LJGI|TC62388 603 100.0 100.0 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1468380.1 length: 100 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 6.6e-16 21-70
HMMTigr TIGR00756 PPR: 0.0011 27-58
59-86
ProfileScan PS51375 PPR 9.756 22-56
57-91
no_ID  
HMMPanther PTHR24015 FAMILY 2.5e-20 1-100
HMMPanther PTHR24015:SF0 SUBFAMILY 2.5e-20 1-100
Wolf-PSORT
Lj2g3v1468380.1	chlo 12, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1468380.1