Miyakogusa Predicted Gene

Lj2g3v1467880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SY17_LOTJA 1068 99.6 100.0 (tr|I3SY17) Serine hydroxymethyltransferase OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G37930.1 958 88.8 94.2 | Symbols: SHM1, STM, SHMT1 | serine transhydroxymethyltransferase 1 | chr4:17831891-17834742 REVERSE LENGTH=517
Medicago Medtr5g030950.1 999 91.9 96.7 | serine hydroxymethyltransferase | HC | chr5:13269359-13264124 | 20130731
Soybean Glyma08g37270.1 999 92.8 96.7  
LJGI gnl|LJGI|TC59359 3065 99.9 99.9 homologue to UniRef100_A9YWS0 Cluster: Serine-hydroxymethyltransferase; n=1; Medicago truncatula|Rep: Serine-hydroxymethyltransferase - Medicago truncatula (Barrel medic), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1467880.1 length: 516 aa.
IPR001085 Serine hydroxymethyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0004372 glycine hydroxymethyltransferase activity    
Biological Process GO:0006544 glycine metabolic process    
Biological Process GO:0006563 L-serine metabolic process    
HAMAP MF_00051 SHMT 43.057 53-506
HMMPIR PIRSF000412 Serine/glycine 1.6e-212 35-511
HMMPanther PTHR11680 SERINE 0 11-516
HMMPfam PF00464 SHMT 3.4e-211 55-451
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1e-100 83-352
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 4.4e-64 353-508
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.2e-180 47-510
IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Molecular Function GO:0004372 glycine hydroxymethyltransferase activity    
Biological Process GO:0006544 glycine metabolic process    
Biological Process GO:0006563 L-serine metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00096 SHMT NA 277-293
no_ID  
HMMPanther PTHR11680:SF0 SUBFAMILY 0 11-516
Wolf-PSORT
Lj2g3v1467880.1	mito 9, chlo 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1467880.1