Miyakogusa Predicted Gene

Lj2g3v1467850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A9YWS1_MEDTR 325 83.5 93.6 (tr|A9YWS1) MADS-box protein OS=Medicago truncatula GN=MTR_5g031000 PE=3 SV=1
TAIR_pep AT4G37940.1 264 70.8 84.9 | Symbols: AGL21 | AGAMOUS-like 21 | chr4:17835695-17838621 REVERSE LENGTH=228
Medicago Medtr5g031000.1 325 83.5 93.6 | MADS-box transcription factor | HC | chr5:13299731-13286491 | 20130731
Soybean Glyma13g32810.1 268 68.9 85.3  
LJGI gnl|LJGI|GO010718 1116 99.8 99.8 similar to UniRef100_A9YWS1 Cluster: MADS-box protein; n=1; Medicago truncatula|Rep: MADS-box protein - Medicago truncatula (Barrel medic), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1467850.1 length: 189 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 1.1e-27 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 2.8e-25 10-59
HMMSmart SM00432 no description 1.1e-38 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 30.922 1-61
superfamily SSF55455 SRF-like 7.9e-33 2-94
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 3.2e-23 80-169
ProfileScan PS51297 K_BOX 14.233 85-175
no_ID  
Coil coil coiled-coil NA 85-113
162-183
HMMPanther PTHR11945 MADS 6.2e-98 1-184
HMMPanther PTHR11945:SF96 AGL21 6.2e-98 1-184
Wolf-PSORT
Lj2g3v1467850.1	nucl 7, chlo 3, mito 2, cyto 1, plas 1, cyto_mito 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1467850.1