Miyakogusa Predicted Gene

Lj2g3v1455360.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LEZ7_SOYBN 1256 84.8 90.0 (tr|K7LEZ7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G15560.1 1002 69.0 80.8 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate synthase | chr4:8884218-8887254 FORWARD LENGTH=717
Medicago Medtr8g068265.1 1209 81.8 89.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr8:28466086-28471025 | 20130731
Soybean Glyma08g37670.1 1199 81.5 87.7  
LJGI gnl|LJGI|TC67900 1469 99.7 99.7 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor; n=1; Medicago truncatula|Rep: 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor - Medicago truncatula (Barrel medic), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1455360.1 length: 711 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
PatternScan PS00801 TRANSKETOLASE_1 NA 94-113
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 4.5e-41 390-552
HMMSmart SM00861 Transketolase, 2.1e-66 391-556
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 9.5e-33 570-693
IPR005477 Deoxyxylulose-5-phosphate synthase
Molecular Function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
HAMAP MF_00315 DXP_synth 41.992 68-702
HMMPfam PF13292 DXP_synthase_N 9.2e-108 69-354
HMMTigr TIGR00204 dxs: 4.5e-231 71-701
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 8.8e-38 564-702
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 1.2e-35 571-701
IPR020826 Transketolase binding site
PatternScan PS00802 TRANSKETOLASE_2 NA 497-513
no_ID  
Gene3D G3DSA:3.40.50.970 no description 6.5e-71 77-374
375-570
HMMPanther PTHR11624 DEHYDROGENASE 0 72-711
HMMPanther PTHR11624:SF20 1-DEOXYXYLULOSE-5-PHOSPHATE 0 72-711
Seg seg seg NA 101-117
superfamily SSF52518 Thiamin 7e-63 44-453
387-580
Wolf-PSORT
Lj2g3v1455360.1	chlo 7, mito 5, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1455360.1