Miyakogusa Predicted Gene

Lj2g3v1455180.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL Q2PEV3_TRIPR 578 54.0 63.0 (tr|Q2PEV3) Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1

TAIR_pep AT5G65540.1 385 37.0 51.6 | Symbols: | unknown protein; Has 6825 Blast hits to 3811 proteins in 289 species: Archae - 0; Bacteria - 184; Metazoa - 2139; Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes - 2874 (source: NCBI BLink). | chr5:26195710-26198112 FORWARD LENGTH=605

Medicago Medtr5g031750.1 538 51.2 61.2 | hypothetical protein | HC | chr5:13626233-13622027 | 20130731

Soybean Glyma09g33260.1 456 56.3 66.7

LJGI gnl|LJGI|FS333918 349 91.3 91.3 weakly similar to UniRef100_A7R174 Cluster: Chromosome undetermined scaffold_340, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_340, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1455180.1 length: 587 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 420-465

Seg seg seg NA 74-88
189-204
378-400
424-464
511-522

Wolf-PSORT

Lj2g3v1455180.1 nucl 12, cyto 1, cysk 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1455180.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	Q2PEV3_TRIPR	578	54.0	63.0	(tr\|Q2PEV3) Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1
TAIR_pep	AT5G65540.1	385	37.0	51.6	\| Symbols: \| unknown protein; Has 6825 Blast hits to 3811 proteins in 289 species: Archae - 0; Bacteria - 184; Metazoa - 2139; Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes - 2874 (source: NCBI BLink). \| chr5:26195710-26198112 FORWARD LENGTH=605
Medicago	Medtr5g031750.1	538	51.2	61.2	\| hypothetical protein \| HC \| chr5:13626233-13622027 \| 20130731
Soybean	Glyma09g33260.1	456	56.3	66.7
LJGI	gnl\|LJGI\|FS333918	349	91.3	91.3	weakly similar to UniRef100_A7R174 Cluster: Chromosome undetermined scaffold_340, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_340, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

no_ID
Lj2g3v1455180.1				length: 587 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	420-465
Seg	seg	seg	NA	74-88 189-204 378-400 424-464 511-522