Miyakogusa Predicted Gene

Lj2g3v1451720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KNL8_SOYBN 865 78.8 82.8 (tr|K7KNL8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G14610.2 760 69.8 78.6 | Symbols: | DEAD box RNA helicase family protein | chr5:4711271-4714713 FORWARD LENGTH=645
Medicago Medtr6g005550.1 840 76.4 82.3 | DEAD-box ATP-dependent RNA helicase-like protein | HC | chr6:822752-816182 | 20130731
Soybean Glyma19g00260.1 859 78.6 82.6  
LJGI gnl|LJGI|TC63774 2198 100.0 100.0 similar to UniRef100_Q9SP26 Cluster: P72 DEAD box protein; n=1; Pisum sativum|Rep: P72 DEAD box protein - Pisum sativum (Garden pea), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1451720.1 length: 750 aa.
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00039 DEAD_ATP_HELICASE NA 310-318
IPR001202 WW domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF00397 WW 5.6e-06 20-50
HMMSmart SM00456 Domain 2.5e-05 19-52
PatternScan PS01159 WW_DOMAIN_1 NA 24-50
ProfileScan PS50020 WW_DOMAIN_2 11.191 18-52
superfamily SSF51045 WW 2.3e-08 14-57
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 8.4e-28 427-498
HMMSmart SM00490 helicase 4.2e-34 418-498
ProfileScan PS51194 HELICASE_CTER 25.855 393-537
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 6.2e-46 183-353
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 3e-65 178-381
ProfileScan PS51192 HELICASE_ATP_BIND_1 30.340 190-364
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 11.800 159-187
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.9e-75 230-521
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.5e-57 142-378
379-536
HMMPanther PTHR24031 FAMILY 2.1e-267 139-660
HMMPanther PTHR24031:SF1 SUBFAMILY 2.1e-267 139-660
Seg seg seg NA 49-78
82-99
492-501
539-599
623-636
699-723
Wolf-PSORT
Lj2g3v1451720.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1451720.1