Miyakogusa Predicted Gene

Lj2g3v1437110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J534_SOYBN 340 58.5 70.8 (tr|I1J534) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G26500.1 258 41.8 59.0 | Symbols: PIRL2 | plant intracellular ras group-related LRR 2 | chr3:9708195-9709944 REVERSE LENGTH=471
Medicago Medtr5g032910.1 329 55.4 65.5 | plant intracellular ras-group-related LRR protein | HC | chr5:14183334-14180381 | 20130731
Soybean Glyma01g03130.1 340 58.5 70.8  
LJGI gnl|LJGI|TC75583 2087 99.8 99.8 weakly similar to UniRef100_A7PCS2 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1437110.1 length: 353 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.53 174-194
ProfileScan PS51450 LRR 5.771 173-195
196-217
219-240
242-263
266-287
289-310
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 8.2 171-193
194-216
217-240
241-263
264-285
287-310
no_ID  
FPrintScan PR00019 LEURICHRPT 1.5e-05 197-210
217-230
Gene3D G3DSA:3.80.10.10 no description 5.6e-40 145-336
HMMPanther PTHR23155 LEUCINE-RICH 6.8e-68 149-336
HMMPanther PTHR23155:SF34 LEUCINE-RICH 6.8e-68 149-336
HMMPfam PF13504 LRR_7 4.3 289-304
HMMPfam PF13855 LRR_8 4.3e-09 197-253
HMMSmart SM00364 Leucine-rich 2.4e+02 171-190
194-213
217-236
240-259
287-306
Seg seg seg NA 24-38
129-142
215-230
superfamily SSF52058 L 6.6e-41 146-353
Wolf-PSORT
Lj2g3v1437110.1	cyto 6, nucl 4, chlo 1, pero 1, cysk 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1437110.1