Miyakogusa Predicted Gene

Lj2g3v1415440.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JYY7_MEDTR 919 91.9 96.0 (tr|G7JYY7) Alanine aminotransferase OS=Medicago truncatula GN=MTR_5g033230 PE=1 SV=1

TAIR_pep AT1G70580.4 857 85.0 92.1 | Symbols: AOAT2, GGT2 | alanine-2-oxoglutarate aminotransferase 2 | chr1:26613222-26615845 FORWARD LENGTH=481

Medicago Medtr5g033230.1 919 91.9 96.0 | glutamate-glyoxylate aminotransferase | HC | chr5:14338389-14330114 | 20130731

Soybean Glyma01g03260.3 906 90.2 95.8

LJGI gnl|LJGI|TC58908 2872 100.0 100.0 homologue to UniRef100_A8IKE5 Cluster: Alanine aminotransferase 2; n=1; Glycine max|Rep: Alanine aminotransferase 2 - Glycine max (Soybean), complete

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v1415440.1 length: 481 aa.

IPR004839 Aminotransferase, class I/classII

method AccNumber shortName E-value location

Biological Process GO:0009058 biosynthetic process

Molecular Function GO:0030170 pyridoxal phosphate binding

HMMPfam PF00155 Aminotran_1_2 1.6e-37 85-447

IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1

Molecular Function GO:0003824 catalytic activity

Molecular Function GO:0030170 pyridoxal phosphate binding

Gene3D G3DSA:3.40.640.10 no description 2.7e-57 85-330

IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2

Molecular Function GO:0003824 catalytic activity

Molecular Function GO:0030170 pyridoxal phosphate binding

Gene3D G3DSA:3.90.1150.10 no description 2.2e-14 331-467

IPR015424 Pyridoxal phosphate-dependent transferase

superfamily SSF53383 PLP-dependent 1.4e-80 1-469

no_ID

HMMPanther PTHR11751 SUBGROUP 2e-246 4-481

HMMPanther PTHR11751:SF29 ALANINE 2e-246 4-481

Wolf-PSORT

Lj2g3v1415440.1 pero 7, cyto 5, nucl 1, mito 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v1415440.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JYY7_MEDTR	919	91.9	96.0	(tr\|G7JYY7) Alanine aminotransferase OS=Medicago truncatula GN=MTR_5g033230 PE=1 SV=1
TAIR_pep	AT1G70580.4	857	85.0	92.1	\| Symbols: AOAT2, GGT2 \| alanine-2-oxoglutarate aminotransferase 2 \| chr1:26613222-26615845 FORWARD LENGTH=481
Medicago	Medtr5g033230.1	919	91.9	96.0	\| glutamate-glyoxylate aminotransferase \| HC \| chr5:14338389-14330114 \| 20130731
Soybean	Glyma01g03260.3	906	90.2	95.8
LJGI	gnl\|LJGI\|TC58908	2872	100.0	100.0	homologue to UniRef100_A8IKE5 Cluster: Alanine aminotransferase 2; n=1; Glycine max\|Rep: Alanine aminotransferase 2 - Glycine max (Soybean), complete

IPR004839	Aminotransferase, class I/classII
Lj2g3v1415440.1				length: 481 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0009058	biosynthetic process
Molecular Function	GO:0030170	pyridoxal phosphate binding
HMMPfam	PF00155	Aminotran_1_2	1.6e-37	85-447
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function	GO:0003824	catalytic activity
Molecular Function	GO:0030170	pyridoxal phosphate binding
Gene3D	G3DSA:3.40.640.10	no description	2.7e-57	85-330
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function	GO:0003824	catalytic activity
Molecular Function	GO:0030170	pyridoxal phosphate binding
Gene3D	G3DSA:3.90.1150.10	no description	2.2e-14	331-467
IPR015424	Pyridoxal phosphate-dependent transferase
superfamily	SSF53383	PLP-dependent	1.4e-80	1-469
no_ID
HMMPanther	PTHR11751	SUBGROUP	2e-246	4-481
HMMPanther	PTHR11751:SF29	ALANINE	2e-246	4-481