Miyakogusa Predicted Gene

Lj2g3v1415400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J553_SOYBN 867 96.5 99.3 (tr|I1J553) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G60780.1 832 90.9 96.7 | Symbols: HAP13 | Clathrin adaptor complexes medium subunit family protein | chr1:22369289-22371885 REVERSE LENGTH=428
Medicago Medtr5g033500.1 853 94.6 98.6 | clathrin assembly protein AP47, putative | HC | chr5:14425505-14431918 | 20130731
Soybean Glyma01g03330.1 866 96.5 99.3  
LJGI gnl|LJGI|TC66040 2527 99.8 99.8 homologue to UniRef100_A7QY06 Cluster: Chromosome undetermined scaffold_235, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_235, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1415400.1 length: 428 aa.
IPR001392 Clathrin adaptor, mu subunit
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
FPrintScan PR00314 CLATHRINADPT 2e-64 15-35
103-130
161-189
236-263
305-320
345-356
HMMPIR PIRSF005992 Adaptor 1.5e-206 4-427
IPR008968 Clathrin adaptor, mu subunit, C-terminal
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 9.6e-92 159-426
ProfileScan PS51072 MHD 99.337 167-427
superfamily SSF49447 Second 6.6e-95 159-427
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 1.7e-36 4-145
IPR018240 Clathrin adaptor, mu subunit, conserved site
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
PatternScan PS00990 CLAT_ADAPTOR_M_1 NA 159-179
PatternScan PS00991 CLAT_ADAPTOR_M_2 NA 256-270
IPR022775 AP complex, mu/sigma subunit
HMMPfam PF01217 Clat_adaptor_s 8.4e-07 7-131
no_ID  
Gene3D G3DSA:2.60.40.1170 no description 6.8e-65 159-320
Gene3D G3DSA:3.30.450.60 no description 7.5e-43 5-141
HMMPanther PTHR11998 CLATHRIN 8.5e-267 4-428
HMMPanther PTHR11998:SF11 CLATHRIN 8.5e-267 4-428
Wolf-PSORT
Lj2g3v1415400.1	cyto 8, extr 3, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1415400.1