Miyakogusa Predicted Gene

Lj2g3v1415270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JC53_SOYBN 373 73.4 81.9 (tr|I1JC53) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G26610.1 258 58.0 75.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:9777025-9780267 FORWARD LENGTH=470
Medicago Medtr5g033680.1 343 78.5 89.0 | polygalacturonase | HC | chr5:14519678-14516292 | 20130731
Soybean Glyma02g04230.1 373 73.4 81.9  
LJGI gnl|LJGI|TC82552 1047 99.6 99.6 similar to UniRef100_A7QP20 Cluster: Chromosome chr1 scaffold_135, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_135, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1415270.1 length: 282 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 3.2e-34 111-278
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1.9e-56 58-278
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 2.4e-60 67-279
no_ID  
HMMPanther PTHR31375 FAMILY 3.8e-83 73-278
HMMPanther PTHR31375:SF0 SUBFAMILY 3.8e-83 73-278
Seg seg seg NA 5-24
57-73
Wolf-PSORT
Lj2g3v1415270.1	chlo 7, vacu 3, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1415270.1