Miyakogusa Predicted Gene

Lj2g3v1415210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K060_MEDTR 447 78.8 85.6 (tr|G7K060) Knotted-1 homeobox protein OS=Medicago truncatula GN=MTR_5g033720 PE=3 SV=1
TAIR_pep AT1G23380.1 329 60.6 72.7 | Symbols: KNAT6, KNAT6L, KNAT6S | KNOTTED1-like homeobox gene 6 | chr1:8297499-8302492 REVERSE LENGTH=327
Medicago Medtr5g033720.1 447 78.8 85.6 | homeobox knotted-like protein | HC | chr5:14544412-14552999 | 20130731
Soybean Glyma02g04190.1 413 76.4 82.2  
LJGI gnl|LJGI|TC70761 1610 99.9 99.9 UniRef100_Q4VPF0 Cluster: Homeobox knotted-1-like protein KNOX3; n=1; Lotus japonicus|Rep: Homeobox knotted-1-like protein KNOX3 - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1415210.1 length: 272 aa.
IPR005539 ELK
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03789 ELK 5.4e-08 208-229
ProfileScan PS51213 ELK 9.830 208-228
IPR005540 KNOX1
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03790 KNOX1 6.9e-24 70-112
IPR005541 KNOX2
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03791 KNOX2 9e-27 120-169
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 3.5e-05 248-272
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.1e-13 233-272
superfamily SSF46689 Homeodomain-like 1.6e-08 229-272
no_ID  
HMMPanther PTHR11850 HOMEOBOX 3.5e-43 71-272
Seg seg seg NA 224-239
Wolf-PSORT
Lj2g3v1415210.1	nucl 12, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1415210.1